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Single cell drop-seq data

Single cell RNA-Seq enables the analysis of thousands of single cells in order to identify and monitor cellular expression patterns. Using the Drop-seq protocol, the Nadia Instrument can profile up to 50,000 single cell libraries in under 20 minutes. 

The below data is generated using the Drop-seq protocol on the Nadia Instrument using a 1:1 mixture of HEK293T and 3T3 cells with both 200 cells and 600 cells. 

Sample #Cells NGS reads/cell Doublet rate Median Genes  Median UMIs
Nadia 200 R1 272 19757 7.3% 2728 6413
Nadia 200 R2 185 26224 6.4% 3107 6299
Nadia 600 R1 537 121975 6.6% 5525 23233
Nadia 600 R2 654 50024 7.8% 4132 11704

 

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